Norwegian openEHR Repository
Name
Microscopy renal biopsy non neoplastic
Description
Microscopic findings related to a non-neoplastic renal biopsy
Keywords
histopathology
pathology
renal
laboratory
Purpose
To record detailed findings about a non-neoplastic renal biopsy
Use
To record detailed findings about microscopic examination of tissue related to glomerular, tubulointerstitial and vascular renal diseases. Use as a component archetype in the context of a suite of archetypes that make up a histopathology report i.e. OBSERVATION.lab_test.histopathology
Misuse
Not designed to be used within any other archetype other than OBSERVATION.lab_test.histopathology.
References
Chang A, Gibson IW, Cohen AH, Weening JW, Jennette JC, and Fogo AB (2012). A position paper on standardizing the nonneoplastic kidney biopsy report. Hum Pathol 43:1192-1196.
Farris AB, Adams CD, Brousaides N, Della Pelle PA, Collins AB, Moradi E, Smith RN, Grimm PC, and Colvin RB (2011). Morphometric and visual evaluation of fibrosis in renal biopsies. J Am Soc Nephrol 22:176-186.
Berden AE, Ferrario F, Hagen EC, Jayne DR, Jennette JC, Joh K, Neumann I, Noel LH, Pusey CD, Waldherr R, Bruijn JA, and Bajema IM (2010). Histopathologic classification of ANCA-associated glomerulonephritis. J Am Soc Nephrol 21:1628-1636.
Koss MN. Handling and interpretation of the medical renal biopsy (2014). Methods Mol Biol; 1180: 323-336
Racusen LC, Solez K, Colvin RB et al. The Banff 97 working classification of renal allograft pathology. Kidney International 1999; 55: 713-723
Solez K, Colvin RB, Racusen LC et al. Banff 07 classification of renal allograft pathology: Updates and future directions. American Journal of Transplantation 2008; 8: 753-760
Jennette JC, D'Agati VD, Olson JL, Silva F. Heptinstall's Pathology of the Kidney. LWW, Philadelphia: 2014;
Weening JJ, D'Agati VD, Schwartz MM, Seshan SV, Alpers CE, Appel GB, Balow JE, Bruijn JA, Cook T, Ferrario F, Fogo AB, Ginzler EM, Hebert L, Hill G, Hill P, Jennette JC, Kong NC, Lesavre P, Lockshin M, Looi LM, Makino H, Moura LA, Nagata M. The classification of glomerulonephritis in systemic lupus erythematosus revisited. J Am Soc Nephrol. 2004 Feb;15(2):241-50. Erratum in: J Am Soc Nephrol. 2004 Mar;15(3):835-6.
Working Group of the International IgA Nephropathy Network and the Renal Pathology Society, Roberts IS, Cook HT, Troyanov S, Alpers CE, Amore A, Barratt J, Berthoux F, Bonsib S, Bruijn JA, Cattran DC, Coppo R, D'Agati V, D'Amico G, Emancipator S, Emma F, Feehally J, Ferrario F, Fervenza FC, Florquin S, Fogo A, Geddes CC, Groene HJ, Haas M, Herzenberg AM, Hill PA, Hogg RJ, Hsu SI, Jennette JC, Joh K, Julian BA, Kawamura T, Lai FM, Li LS, Li PK, Liu ZH, Mackinnon B, Mezzano S, Schena FP, Tomino Y, Walker PD, Wang H, Weening JJ, Yoshikawa N, Zhang H. The Oxford classification of IgA nephropathy: pathology definitions, correlations, and reproducibility. Kidney Int. 2009 Sep;76(5):546-56.
Archetype Id
openEHR-EHR-CLUSTER.microscopy_renal_biopsy_non_neoplastic.v0
Copyright
© Nasjonal IKT HF
Licencing
This work is licensed under the Creative Commons Attribution-ShareAlike 4.0 International License. To view a copy of this license, visit http://creativecommons.org/licenses/by-sa/4.0/.
Original Author
Sabine Leh
Haukeland University Hospital
Haukeland University Hospital
Date Originally Authored
2014-06-08
Name | Card | Type | Description |
---|---|---|---|
|
0..1 | CLUSTER |
Describes tissue types in the renal biopsy specimen.
CLUSTER
|
Cortex
|
0..1 |
CHOICE OF
DV_CODED_TEXT
DV_QUANTITY
DV_PROPORTION
|
Cortical tissue present, alternatively core length with cortical tissue, alternatively proportion of cortical tissue in relation to the core with renal tissue.
Constraint for DV_CODED_TEXT
DV_QUANTITY
DV_PROPORTION
|
Medulla
|
0..1 |
CHOICE OF
DV_CODED_TEXT
DV_QUANTITY
DV_PROPORTION
|
Medullary tissue present, alternatively core length with medullary tissue, alternatively proportion of medullary tissue in relation to the core with renal tissue.
Constraint for DV_CODED_TEXT
DV_QUANTITY
DV_PROPORTION
|
Renale capsule
|
0..1 | DV_TEXT |
A statement whether the renal capsule is present.
|
Other tissue elements
|
0..1 |
CHOICE OF
DV_CODED_TEXT
DV_TEXT
|
Description of other tissue elements, e.g. muscle tissue.
Constraint for DV_CODED_TEXT
|
|
0..1 | CLUSTER |
Description of glomerular changes.
CLUSTER
|
Glomeruli
|
0..1 | DV_COUNT |
The maximum number of glomeruli irrespective of size present in one section; structures consisting of Bowman's capsule with empty Bowman's space are excluded.
|
Scorable glomeruli
|
0..1 | DV_COUNT |
The number of glomeruli judged as adequate for scoring by the reporting pathologist.
|
Glomeruli solely with necrosis
|
0..1 | DV_COUNT |
The number of glomeruli showing fibrinoid necrosis without crescent formation.
|
Glomeruli with crescents
|
0..1 | DV_COUNT |
The number of glomeruli showing cellular or fibrocellular crescents.
|
Glomeruli with ischemic changes
|
0..1 | DV_COUNT |
The number of glomeruli showing some degree of tuft retraction and wrinkling of capillary walls. Chronic ischemic changes might show fibrosis of Bowman's capsule.
|
Glomeruli with adhesions
|
0..1 | DV_COUNT |
The number of glomeruli showing coneective tissue connections between the tuft and Bowman's capsule without overt sclerosis.
|
Glomeruli with segmental sclerosis
|
0..1 | DV_COUNT |
The number of glomeruli showing obliteration of capillary lumen by extracellular matrix in a portion of the tuft area with or without adhesions to the Bowman capsule, hyaline lesions, foam cells.
|
Glomeruli with global sclerosis
|
0..1 | DV_COUNT |
The number of glomeruli showing scarring with obliteration of capillary lumen by extracellular matrix in the entire or nearly entire glomerular tuft.
|
Normal glomeruli
|
0..1 | DV_COUNT |
The number of glomeruli which appear normal without major changes.
|
|
0..1 | CLUSTER |
Description of mesangial changes.
CLUSTER
|
No abnormality detected
|
0..1 | DV_BOOLEAN |
Statement that no abnormality was detected on examination of the mesangial areas.
|
Details of the mesangium
|
0..1 | DV_TEXT |
A narrative description of mesangial changes.
|
Mesangial matrix increase
|
0..1 |
CHOICE OF
DV_CODED_TEXT
DV_BOOLEAN
|
Visual assessment of the amount of mesangial matrix.
Constraint for DV_CODED_TEXT
|
Mesangial hypercellularity
|
0..1 |
CHOICE OF
DV_CODED_TEXT
DV_BOOLEAN
|
A visual assessment of the cellularity of the mesangium. Normally there are 1 - 3 cells per mesangial area. The score is based on the most cellular mesangial area. Mesangial areas adjacent to the vascular stalk should not be scored.
Comment
Definitions based on Roberts et al, 2009.
Constraint for DV_CODED_TEXT
|
Mesangial nodularity
|
0..1 |
CHOICE OF
DV_CODED_TEXT
DV_BOOLEAN
|
A visual assessment of the presence of acellular PAS positive mesangial nodules.
Constraint for DV_CODED_TEXT
|
|
0..1 | CLUSTER |
Description of glomerular capillary changes.
CLUSTER
|
No abnormality detected
|
0..1 | DV_BOOLEAN |
Statement that no abnormality was detected on examination of the glomerular capillaries.
|
Details of glomerular capillaries
|
0..1 | DV_TEXT |
A narrative description of glomerular capillary changes.
|
Capillary wall thickening
|
0..* |
CHOICE OF
DV_CODED_TEXT
DV_BOOLEAN
|
A visual assessment of the capillary wall thickness.
Constraint for DV_CODED_TEXT
|
Capillary wall duplication
|
0..* |
CHOICE OF
DV_BOOLEAN
DV_CODED_TEXT
|
A visual assessment of the presence of capillary wall duplication.
Constraint for DV_CODED_TEXT
|
Mesangial cell interposition
|
0..1 |
CHOICE OF
DV_TEXT
DV_CODED_TEXT
|
A visual assesment of the presence of interposed cells in the capillary periphery.
Constraint for DV_CODED_TEXT
|
|
0..1 | CLUSTER |
Description of changes in the capillary lumens.
CLUSTER
|
|
0..1 | CLUSTER |
Findings related to intracapillary thrombi.
CLUSTER
|
Thrombi
|
0..1 |
CHOICE OF
DV_CODED_TEXT
DV_TEXT
|
Visual assessment of intracapillary thrombi.
Constraint for DV_CODED_TEXT
|
Thrombus type
|
0..1 | DV_CODED_TEXT |
Type of intracapillary thrombi.
Constraint for DV_CODED_TEXT
|
|
0..1 | CLUSTER |
Findings related to endocapillary cellularity.
CLUSTER
|
Endocapillary hypercellularity
|
0..1 |
CHOICE OF
DV_CODED_TEXT
DV_BOOLEAN
|
Visual assessment of endocapillary hypercellularity.
Constraint for DV_CODED_TEXT
|
Cell type
|
0..* |
CHOICE OF
DV_TEXT
DV_CODED_TEXT
|
Composition of intracapillary cells.
Constraint for DV_CODED_TEXT
|
|
0..1 | CLUSTER |
Description of podocyte changes.
CLUSTER
|
No abnormality detected
|
0..1 | DV_BOOLEAN |
Statement that no abnormality was detected on examination of podocytes.
|
Details of podocytes
|
0..1 | DV_TEXT |
A narrative description of podocyte changes.
|
Hypertrophy
|
0..1 |
CHOICE OF
DV_CODED_TEXT
DV_TEXT
DV_BOOLEAN
|
Enlarged podocytes often with amphophil cytoplasm.
Constraint for DV_CODED_TEXT
|
Bi- or multinucleated podocytes
|
0..1 | DV_CODED_TEXT |
Podocytes with 2 or more nuclei.
Constraint for DV_CODED_TEXT
|
Resorption droplets
|
0..1 | DV_CODED_TEXT |
Podocytes with PAS positive resorption droplets.
Constraint for DV_CODED_TEXT
|
Pseudocysts
|
0..1 | DV_CODED_TEXT |
Podocytes with pseudocysts.
Constraint for DV_CODED_TEXT
|
Details of specific glomerular changes
|
0..* | Slot (Cluster) |
Slot for detailed description of specific glomerular changes.
Include:
openEHR-EHR-CLUSTER.glomerulus_segmental_glomerulosclerosis_classification.v1.
Slot
Slot
|
Description of glomeruli
|
0..1 | DV_TEXT |
A narrative description of glomerular findings, e.g. mesangial and endocapillary cellularity, capillary wall changes, podocytes, Bowman's space.
For structured description of specific renal diseases use appropriate cluster (IgA nephropathy, lupus nephritis).
|
|
0..1 | CLUSTER |
Description of tubular changes.
CLUSTER
|
No abnormality detected
|
0..1 | DV_BOOLEAN |
A statement that no abnormality was detected in renal tubules.
|
Tubular epithelial cell changes
|
0..* | DV_CODED_TEXT |
Description of tubular epithelial cell changes. Multiple choices possible.
Constraint for DV_CODED_TEXT
|
Casts in tubules
|
0..* | DV_CODED_TEXT |
Choose the type of casts present in tubuli. Multiple choices possible.
Constraint for DV_CODED_TEXT
|
|
0..1 | CLUSTER |
Structured report of kind of tubular casts present.
CLUSTER
|
Tamm Horsfall protein
|
0..1 | DV_BOOLEAN |
Presence of intratubular Tamm Horsfall protein.
|
Hyaline casts
|
0..1 | DV_BOOLEAN |
Presence of hyalin casts in tubular lumen.
|
Granular casts
|
0..1 | DV_BOOLEAN |
Presence of granular casts in tubular lumen.
|
Detached cells
|
0..1 | DV_BOOLEAN |
Detached cells, commonly epithelial cells, present in the tubular lumen.
|
Red blood cells
|
0..1 | DV_BOOLEAN |
Collections of red blood cells or red blood cell casts present in tubular lumen.
|
Granulocytes
|
0..1 | DV_BOOLEAN |
Presence of neutrophil granulocytes in tubular lumen.
|
Mixed casts
|
0..1 | DV_BOOLEAN |
Casts consisting of more than one component.
|
Pigmented casts
|
0..1 | DV_BOOLEAN |
Discolorated casts e.g. due to hemoglobin, myoglobin, drug pigments, bilirubin, melanin.
|
Myeloma casts
|
0..1 | DV_BOOLEAN |
Characteristic myeloma casts, often surrounded by reactive tubular epithelial cells. or multinucleated cells, present in tubular lumen.
|
Crystals
|
0..1 | DV_BOOLEAN |
Crystals present in tubular lumen.
|
|
0..1 | CLUSTER |
Semiquantitative or quantitative assessment of tubular atrophy.
CLUSTER
|
Tubular atrophy semiquantitative
|
0..1 | DV_CODED_TEXT |
Semiquantitative visual assessment of tubular atrophy.
Constraint for DV_CODED_TEXT
|
Tubules description
|
0..1 | DV_TEXT |
Desription of tubular changes, e.g. hyalin droplet change, acute epithelial damage, cytoplasmic vacuolation, sloughing of cells, loss of brush border.
|
|
0..1 | CLUSTER |
Interstitial changes, especially semiquantitative or quantitative assessment of interstitial fibrosis.
CLUSTER
|
No abnormality detected
|
0..1 | DV_BOOLEAN |
A statement that no abnormality was detected in the renal interstitium.
|
|
0..1 | CLUSTER |
Quantification of interstitial fibrosis by image analysis methods.
CLUSTER
|
Image analysis details
|
0..* | Slot (Cluster) |
To record details of the image analysis, e.g. software, algorithm.
Slot
Slot
|
Technique
|
0..1 |
CHOICE OF
DV_CODED_TEXT
DV_TEXT
|
Technique used to quantify fibrosis.
Constraint for DV_CODED_TEXT
|
Percentage interstitial fibrosis
|
0..1 | DV_QUANTITY |
Percentage of the renal cortical tissue involved by fibrosis.
DV_QUANTITY
|
Multimedia representation of image analysis
|
0..1 | DV_MULTIMEDIA |
Images, graphs and tables from automatic image analysis of interstitial fibrosis.
DV_MULTIMEDIA
|
Cortical area with fibrosis estimated
|
0..1 | DV_QUANTITY |
Visual quantification of interstitial fibrosis; The fibrosis percentage is the percentage of abnormal cortical tissue with fibrosis.
DV_QUANTITY
|
Fibrous tissue estimated
|
0..1 | DV_QUANTITY |
Visual quantification of interstitial fibrosis; The fibrosis percentage is the percentage of all cortical tissue (excluding tubules and glomeruli) occupied by fibrous tissue.
DV_QUANTITY
|
Interstitium description
|
0..1 | DV_TEXT |
Description of interstitial changes, e.g. edema, inflammatory cells, deposits.
|
|
0..1 | CLUSTER |
Changes affecting arteries, arterioles, venes and peritubular capillaries.
CLUSTER
|
No abnormality detected
|
0..1 | DV_BOOLEAN |
A statement that no abnormality was detected in the renal vasculature.
|
Number of arteries
|
0..1 | DV_COUNT |
Number of arteries in a renal biopsy.
|
Arteriosclerosis
|
0..1 |
CHOICE OF
DV_CODED_TEXT
DV_TEXT
|
Amount of arteriosclerosis in the most affected vessel.
Constraint for DV_CODED_TEXT
|
Arteriolosclerosis
|
0..1 |
CHOICE OF
DV_TEXT
DV_CODED_TEXT
|
Amount of arteriolosclerosis in the most affected vessel.
Constraint for DV_CODED_TEXT
|
Vasculature description
|
0..1 | DV_TEXT |
Description of vascular changes, e.g. vasculitis, venulitis. For description of severity of arteriosclerosis and arteriolosclerosis use coded text.
|
|
0..1 | CLUSTER |
Findings related to amyloid deposition.
CLUSTER
|
Amyloid not detected
|
0..1 | DV_BOOLEAN |
A statement that no amyloid deposition was detected.
|
Details of amyloid deposition
|
0..* | Slot (Cluster) |
Slot for detailed description of specific glomerular changes.
Include:
openEHR-EHR-CLUSTER.amyloid_deposition.v1
Slot
Slot
|
Specific clinical situations
|
0..* | Slot (Cluster) |
Detailed structured description for specific clinical situations, e.g. biopsy of renal transplant, lupus nephritis, IgA nephropathy.
Slot
Slot
|
Multimedia representation
|
0..1 | DV_MULTIMEDIA |
Images from lesions could be attached here.
DV_MULTIMEDIA
|
archetype (adl_version=1.4; uid=324df9ac-fdc6-4e36-ae8f-b78755354d87) openEHR-EHR-CLUSTER.microscopy_renal_biopsy_non_neoplastic.v0 concept [at0000] -- Microscopy renal biopsy non neoplastic language original_language = <[ISO_639-1::en]> description original_author = < ["name"] = <"Sabine Leh"> ["organisation"] = <"Haukeland University Hospital"> ["email"] = <"sabine.leh@helse-bergen.no"> ["date"] = <"2014-06-08"> > details = < ["en"] = < language = <[ISO_639-1::en]> purpose = <"To record detailed findings about a non-neoplastic renal biopsy"> use = <"To record detailed findings about microscopic examination of tissue related to glomerular, tubulointerstitial and vascular renal diseases. Use as a component archetype in the context of a suite of archetypes that make up a histopathology report i.e. OBSERVATION.lab_test.histopathology"> keywords = <"histopathology", "pathology", "renal", "laboratory"> misuse = <"Not designed to be used within any other archetype other than OBSERVATION.lab_test.histopathology."> copyright = <"© Nasjonal IKT HF"> > > lifecycle_state = <"in_development"> other_contributors = <> other_details = < ["licence"] = <"This work is licensed under the Creative Commons Attribution-ShareAlike 4.0 International License. To view a copy of this license, visit http://creativecommons.org/licenses/by-sa/4.0/."> ["custodian_organisation"] = <"Nasjonal IKT"> ["references"] = <"Chang A, Gibson IW, Cohen AH, Weening JW, Jennette JC, and Fogo AB (2012). A position paper on standardizing the nonneoplastic kidney biopsy report. Hum Pathol 43:1192-1196. Farris AB, Adams CD, Brousaides N, Della Pelle PA, Collins AB, Moradi E, Smith RN, Grimm PC, and Colvin RB (2011). Morphometric and visual evaluation of fibrosis in renal biopsies. J Am Soc Nephrol 22:176-186. Berden AE, Ferrario F, Hagen EC, Jayne DR, Jennette JC, Joh K, Neumann I, Noel LH, Pusey CD, Waldherr R, Bruijn JA, and Bajema IM (2010). Histopathologic classification of ANCA-associated glomerulonephritis. J Am Soc Nephrol 21:1628-1636. Koss MN. Handling and interpretation of the medical renal biopsy (2014). Methods Mol Biol; 1180: 323-336 Racusen LC, Solez K, Colvin RB et al. The Banff 97 working classification of renal allograft pathology. Kidney International 1999; 55: 713-723 Solez K, Colvin RB, Racusen LC et al. Banff 07 classification of renal allograft pathology: Updates and future directions. American Journal of Transplantation 2008; 8: 753-760 Jennette JC, D'Agati VD, Olson JL, Silva F. Heptinstall's Pathology of the Kidney. LWW, Philadelphia: 2014; Weening JJ, D'Agati VD, Schwartz MM, Seshan SV, Alpers CE, Appel GB, Balow JE, Bruijn JA, Cook T, Ferrario F, Fogo AB, Ginzler EM, Hebert L, Hill G, Hill P, Jennette JC, Kong NC, Lesavre P, Lockshin M, Looi LM, Makino H, Moura LA, Nagata M. The classification of glomerulonephritis in systemic lupus erythematosus revisited. J Am Soc Nephrol. 2004 Feb;15(2):241-50. Erratum in: J Am Soc Nephrol. 2004 Mar;15(3):835-6. Working Group of the International IgA Nephropathy Network and the Renal Pathology Society, Roberts IS, Cook HT, Troyanov S, Alpers CE, Amore A, Barratt J, Berthoux F, Bonsib S, Bruijn JA, Cattran DC, Coppo R, D'Agati V, D'Amico G, Emancipator S, Emma F, Feehally J, Ferrario F, Fervenza FC, Florquin S, Fogo A, Geddes CC, Groene HJ, Haas M, Herzenberg AM, Hill PA, Hogg RJ, Hsu SI, Jennette JC, Joh K, Julian BA, Kawamura T, Lai FM, Li LS, Li PK, Liu ZH, Mackinnon B, Mezzano S, Schena FP, Tomino Y, Walker PD, Wang H, Weening JJ, Yoshikawa N, Zhang H. The Oxford classification of IgA nephropathy: pathology definitions, correlations, and reproducibility. Kidney Int. 2009 Sep;76(5):546-56. "> ["current_contact"] = <"Sabine Leh, Haukeland University Hospital, sabine.leh@helse-bergen.no"> ["original_namespace"] = <"no.nasjonalikt"> ["original_publisher"] = <"Nasjonal IKT"> ["custodian_namespace"] = <"no.nasjonalikt"> ["MD5-CAM-1.0.1"] = <"45ED5CF84F253443E59D1D1B2084F07C"> ["build_uid"] = <"be1b5cc5-9918-4c14-99ff-1709f66d79f4"> ["revision"] = <"0.0.1-alpha"> > definition CLUSTER[at0000] matches { -- Microscopy renal biopsy non neoplastic items cardinality matches {1..*; unordered} matches { CLUSTER[at0001] occurrences matches {0..1} matches { -- Renal biopsy overall description items cardinality matches {1..*; unordered} matches { ELEMENT[at0003] occurrences matches {0..1} matches { -- Cortex value matches { DV_CODED_TEXT matches { defining_code matches { [local:: at0004, -- Present at0005, -- Absent at0006] -- Indeterminate } } C_DV_QUANTITY < property = <[openehr::122]> list = < ["1"] = < units = <"mm"> > > > DV_PROPORTION matches { is_integral matches {True} type matches {2} } } } ELEMENT[at0007] occurrences matches {0..1} matches { -- Medulla value matches { DV_CODED_TEXT matches { defining_code matches { [local:: at0008, -- Present at0009, -- Absent at0010] -- Indeterminate } } C_DV_QUANTITY < property = <[openehr::122]> list = < ["1"] = < units = <"mm"> > > > DV_PROPORTION matches { is_integral matches {True} type matches {2} } } } ELEMENT[at0011] occurrences matches {0..1} matches { -- Renale capsule name matches { DV_TEXT matches {*} } value matches { DV_BOOLEAN matches { value matches {True, False} } } } ELEMENT[at0012] occurrences matches {0..1} matches { -- Other tissue elements value matches { DV_CODED_TEXT matches { defining_code matches { [local:: at0013, -- Sceletal muscle and/or fat tissue and/or connective tissue at0014] -- Renal pelvis mucosa } } DV_TEXT matches {*} } } } } CLUSTER[at0015] occurrences matches {0..1} matches { -- Glomeruli items cardinality matches {1..*; unordered} matches { ELEMENT[at0016] occurrences matches {0..1} matches { -- Glomeruli value matches { DV_COUNT matches {*} } } ELEMENT[at0017] occurrences matches {0..1} matches { -- Scorable glomeruli value matches { DV_COUNT matches {*} } } ELEMENT[at0019] occurrences matches {0..1} matches { -- Glomeruli solely with necrosis value matches { DV_COUNT matches {*} } } ELEMENT[at0020] occurrences matches {0..1} matches { -- Glomeruli with crescents value matches { DV_COUNT matches {*} } } ELEMENT[at0021] occurrences matches {0..1} matches { -- Glomeruli with ischemic changes value matches { DV_COUNT matches {*} } } ELEMENT[at0208] occurrences matches {0..1} matches { -- Glomeruli with adhesions value matches { DV_COUNT matches {*} } } ELEMENT[at0022] occurrences matches {0..1} matches { -- Glomeruli with segmental sclerosis value matches { DV_COUNT matches {*} } } ELEMENT[at0023] occurrences matches {0..1} matches { -- Glomeruli with global sclerosis value matches { DV_COUNT matches {*} } } ELEMENT[at0024] occurrences matches {0..1} matches { -- Normal glomeruli value matches { DV_COUNT matches {*} } } CLUSTER[at0115] occurrences matches {0..1} matches { -- Mesangium items cardinality matches {1..*; unordered} matches { ELEMENT[at0116] occurrences matches {0..1} matches { -- No abnormality detected value matches { DV_BOOLEAN matches { value matches {True, False} } } } ELEMENT[at0118] occurrences matches {0..1} matches { -- Details of the mesangium value matches { DV_TEXT matches {*} } } ELEMENT[at0119] occurrences matches {0..1} matches { -- Mesangial matrix increase value matches { DV_CODED_TEXT matches { defining_code matches { [local:: at0120, -- Absent at0121, -- Slight at0122, -- Moderate at0123, -- Severe at0124, -- Equivocal at0126] -- Indeterminate } } DV_BOOLEAN matches { value matches {True, False} } } } ELEMENT[at0128] occurrences matches {0..1} matches { -- Mesangial hypercellularity value matches { DV_CODED_TEXT matches { defining_code matches { [local:: at0129, -- Absent at0130, -- Slight at0131, -- Moderate at0132, -- Severe at0133, -- Equivocal at0134] -- Indeterminate } } DV_BOOLEAN matches { value matches {True, False} } } } ELEMENT[at0193] occurrences matches {0..1} matches { -- Mesangial nodularity value matches { DV_CODED_TEXT matches { defining_code matches { [local:: at0194, -- Absent at0195, -- Present at0196, -- Equivocal at0197] -- Indeterminate } } DV_BOOLEAN matches { value matches {True, False} } } } } } CLUSTER[at0138] occurrences matches {0..1} matches { -- Capillaries items cardinality matches {1..*; unordered} matches { ELEMENT[at0139] occurrences matches {0..1} matches { -- No abnormality detected value matches { DV_BOOLEAN matches { value matches {True, False} } } } ELEMENT[at0142] occurrences matches {0..1} matches { -- Details of glomerular capillaries value matches { DV_TEXT matches {*} } } ELEMENT[at0140] occurrences matches {0..*} matches { -- Capillary wall thickening value matches { DV_CODED_TEXT matches { defining_code matches { [local:: at0143, -- Absent at0144, -- Focal at0145, -- Diffuse at0146, -- Segmental at0147, -- Global at0148, -- Equivocal at0149] -- Indeterminate } } DV_BOOLEAN matches { value matches {True, False} } } } ELEMENT[at0150] occurrences matches {0..*} matches { -- Capillary wall duplication value matches { DV_BOOLEAN matches { value matches {True, False} } DV_CODED_TEXT matches { defining_code matches { [local:: at0151, -- Absent at0152, -- Focal at0153, -- Diffuse at0154, -- Segmental at0155, -- Global at0156, -- Equivocal at0157] -- Indeterminate } } } } ELEMENT[at0188] occurrences matches {0..1} matches { -- Mesangial cell interposition value matches { DV_TEXT matches {*} DV_CODED_TEXT matches { defining_code matches { [local:: at0189, -- Present at0190, -- Absent at0191, -- Equivocal at0192] -- Indeterminate } } } } CLUSTER[at0159] occurrences matches {0..1} matches { -- Capillary lumen items cardinality matches {1..*; unordered} matches { CLUSTER[at0184] occurrences matches {0..1} matches { -- Thrombi items cardinality matches {1..*; unordered} matches { ELEMENT[at0168] occurrences matches {0..1} matches { -- Thrombi value matches { DV_CODED_TEXT matches { defining_code matches { [local:: at0169, -- Absent at0178, -- Focal at0179, -- Diffuse at0180, -- Segmental at0181, -- Global at0182, -- Equivocal at0183] -- Indeterminate } } DV_TEXT matches {*} } } ELEMENT[at0185] occurrences matches {0..1} matches { -- Thrombus type value matches { DV_CODED_TEXT matches { defining_code matches { [local:: at0186, -- Hyalin at0187] -- Fibrin } } } } } } CLUSTER[at0170] occurrences matches {0..1} matches { -- Endocapillary hypercellularity items cardinality matches {1..*; unordered} matches { ELEMENT[at0160] occurrences matches {0..1} matches { -- Endocapillary hypercellularity value matches { DV_CODED_TEXT matches { defining_code matches { [local:: at0161, -- Absent at0162, -- Focal at0163, -- Diffuse at0164, -- Segmental at0165, -- Global at0166, -- Equivocal at0167] -- Indeterminate } } DV_BOOLEAN matches { value matches {True, False} } } } ELEMENT[at0171] occurrences matches {0..*} matches { -- Cell type value matches { DV_TEXT matches {*} DV_CODED_TEXT matches { defining_code matches { [local:: at0172, -- Endothelial cells at0173, -- Macrophages at0174, -- Neutrophil granulocytes at0175, -- Lymphocytes at0176] -- Atypical cells } } } } } } } } } } CLUSTER[at0088] occurrences matches {0..1} matches { -- Podocytes items cardinality matches {1..*; unordered} matches { ELEMENT[at0117] occurrences matches {0..1} matches { -- No abnormality detected value matches { DV_BOOLEAN matches { value matches {True, False} } } } ELEMENT[at0125] occurrences matches {0..1} matches { -- Details of podocytes value matches { DV_TEXT matches {*} } } ELEMENT[at0089] occurrences matches {0..1} matches { -- Hypertrophy value matches { DV_CODED_TEXT matches { defining_code matches { [local:: at0091, -- Absent at0092, -- Slight at0093, -- Moderate at0094, -- Severe at0113, -- Equivocal at0114] -- Indeterminate } } DV_TEXT matches {*} DV_BOOLEAN matches { value matches {True, False} } } } ELEMENT[at0096] occurrences matches {0..1} matches { -- Bi- or multinucleated podocytes value matches { DV_CODED_TEXT matches { defining_code matches { [local:: at0097, -- Absent at0098, -- Present at0100, -- Equivocal at0099; -- Indeterminate at0097] -- assumed value } } } } ELEMENT[at0101] occurrences matches {0..1} matches { -- Resorption droplets value matches { DV_CODED_TEXT matches { defining_code matches { [local:: at0102, -- Absent at0103, -- Singular cells at0104, -- Numerous cells at0106, -- Equivocal at0105] -- Indeterminate } } } } ELEMENT[at0107] occurrences matches {0..1} matches { -- Pseudocysts value matches { DV_CODED_TEXT matches { defining_code matches { [local:: at0108, -- Absent at0109, -- Singular at0110, -- Numerous at0111, -- Equivocal at0112] -- Indeterminate } } } } } } allow_archetype CLUSTER[at0028] occurrences matches {0..*} matches { -- Details of specific glomerular changes include archetype_id/value matches {/.*/} } ELEMENT[at0026] occurrences matches {0..1} matches { -- Description of glomeruli value matches { DV_TEXT matches {*} } } } } CLUSTER[at0029] occurrences matches {0..1} matches { -- Tubules items cardinality matches {1..*; unordered} matches { ELEMENT[at0209] occurrences matches {0..1} matches { -- No abnormality detected value matches { DV_BOOLEAN matches { value matches {True, False} } } } ELEMENT[at0202] occurrences matches {0..*} matches { -- Tubular epithelial cell changes value matches { DV_CODED_TEXT matches { defining_code matches { [local:: at0203, -- Hyaline droplet change at0204, -- Fine vacuolization at0205, -- Coarse vacuolization at0206, -- Fatty change at0207] -- Giant mitochondria } } } } ELEMENT[at0080] occurrences matches {0..*} matches { -- Casts in tubules value matches { DV_CODED_TEXT matches { defining_code matches { [local:: at0032, -- Tamm Horsfall protein at0033, -- Hyaline casts at0034, -- Granular casts at0035, -- Detached cells at0036, -- Red blood cells at0037, -- Granulocytes at0081, -- Mixed casts at0082, -- Pigmented casts at0031, -- Myeloma casts at0038] -- Crystals } } } } CLUSTER[at0030] occurrences matches {0..1} matches { -- Tubular casts items cardinality matches {1..*; unordered} matches { ELEMENT[at0032] occurrences matches {0..1} matches { -- Tamm Horsfall protein value matches { DV_BOOLEAN matches { value matches {True, False} } } } ELEMENT[at0033] occurrences matches {0..1} matches { -- Hyaline casts value matches { DV_BOOLEAN matches { value matches {True, False} } } } ELEMENT[at0034] occurrences matches {0..1} matches { -- Granular casts value matches { DV_BOOLEAN matches { value matches {True, False} } } } ELEMENT[at0035] occurrences matches {0..1} matches { -- Detached cells value matches { DV_BOOLEAN matches { value matches {True, False} } } } ELEMENT[at0036] occurrences matches {0..1} matches { -- Red blood cells value matches { DV_BOOLEAN matches { value matches {True, False} } } } ELEMENT[at0037] occurrences matches {0..1} matches { -- Granulocytes value matches { DV_BOOLEAN matches { value matches {True, False} } } } ELEMENT[at0081] occurrences matches {0..1} matches { -- Mixed casts value matches { DV_BOOLEAN matches { value matches {True, False} } } } ELEMENT[at0082] occurrences matches {0..1} matches { -- Pigmented casts value matches { DV_BOOLEAN matches { value matches {True, False} } } } ELEMENT[at0031] occurrences matches {0..1} matches { -- Myeloma casts value matches { DV_BOOLEAN matches { value matches {True, False} } } } ELEMENT[at0038] occurrences matches {0..1} matches { -- Crystals value matches { DV_BOOLEAN matches { value matches {True, False} } } } } } CLUSTER[at0041] occurrences matches {0..1} matches { -- Tubular atrophy items cardinality matches {1..*; unordered} matches { ELEMENT[at0042] occurrences matches {0..1} matches { -- Tubular atrophy semiquantitative value matches { DV_CODED_TEXT matches { defining_code matches { [local:: at0043, -- Absent at0044, -- Slight at0045, -- Moderate at0046, -- Severe at0047] -- Indeterminate } } } } } } ELEMENT[at0048] occurrences matches {0..1} matches { -- Tubules description value matches { DV_TEXT matches {*} } } } } CLUSTER[at0049] occurrences matches {0..1} matches { -- Interstitium items cardinality matches {1..*; unordered} matches { ELEMENT[at0210] occurrences matches {0..1} matches { -- No abnormality detected value matches { DV_BOOLEAN matches { value matches {True, False} } } } CLUSTER[at0050] occurrences matches {0..1} matches { -- Quantification of interstitial fibrosis items cardinality matches {1..*; unordered} matches { allow_archetype CLUSTER[at0051] occurrences matches {0..*} matches { -- Image analysis details include archetype_id/value matches {/.*/} } ELEMENT[at0052] occurrences matches {0..1} matches { -- Technique value matches { DV_CODED_TEXT matches { defining_code matches { [local:: at0053, -- Sirius red unpolarized at0054, -- Sirius red polarized at0055] -- Collagen III immunohistochemistry } } DV_TEXT matches {*} } } ELEMENT[at0056] occurrences matches {0..1} matches { -- Percentage interstitial fibrosis value matches { C_DV_QUANTITY < property = <[openehr::507]> list = < ["1"] = < units = <"%"> > > > } } ELEMENT[at0079] occurrences matches {0..1} matches { -- Multimedia representation of image analysis value matches { DV_MULTIMEDIA matches { media_type matches {[openEHR::]} } } } } } ELEMENT[at0057] occurrences matches {0..1} matches { -- Cortical area with fibrosis estimated value matches { C_DV_QUANTITY < property = <[openehr::507]> list = < ["1"] = < units = <"%"> magnitude = <|<=0.0|> precision = <|0|> > > > } } ELEMENT[at0058] occurrences matches {0..1} matches { -- Fibrous tissue estimated value matches { C_DV_QUANTITY < property = <[openehr::507]> list = < ["1"] = < units = <"%"> precision = <|0|> > > > } } ELEMENT[at0059] occurrences matches {0..1} matches { -- Interstitium description value matches { DV_TEXT matches {*} } } } } CLUSTER[at0060] occurrences matches {0..1} matches { -- Vasculature items cardinality matches {1..*; unordered} matches { ELEMENT[at0211] occurrences matches {0..1} matches { -- No abnormality detected value matches { DV_BOOLEAN matches { value matches {True, False} } } } ELEMENT[at0061] occurrences matches {0..1} matches { -- Number of arteries value matches { DV_COUNT matches {*} } } ELEMENT[at0062] occurrences matches {0..1} matches { -- Arteriosclerosis value matches { DV_CODED_TEXT matches { defining_code matches { [local:: at0063, -- Not present/minimal at0064, -- Mild at0065, -- Moderate at0066] -- Severe } } DV_TEXT matches {*} } } ELEMENT[at0067] occurrences matches {0..1} matches { -- Arteriolosclerosis value matches { DV_TEXT matches {*} DV_CODED_TEXT matches { defining_code matches { [local:: at0068, -- Absent at0069, -- Present - nodular at0070] -- Present - circumferential } } } } ELEMENT[at0071] occurrences matches {0..1} matches { -- Vasculature description value matches { DV_TEXT matches {*} } } } } CLUSTER[at0072] occurrences matches {0..1} matches { -- Amyloid items cardinality matches {1..*; unordered} matches { ELEMENT[at0212] occurrences matches {0..1} matches { -- Amyloid not detected value matches { DV_BOOLEAN matches { value matches {True, False} } } } allow_archetype CLUSTER[at0076] occurrences matches {0..*} matches { -- Details of amyloid deposition include archetype_id/value matches {/.*/} } } } allow_archetype CLUSTER[at0077] occurrences matches {0..*} matches { -- Specific clinical situations include archetype_id/value matches {/.*/} } ELEMENT[at0078] occurrences matches {0..1} matches { -- Multimedia representation value matches { DV_MULTIMEDIA matches { media_type matches {[openEHR::]} } } } } } ontology term_definitions = < ["en"] = < items = < ["at0000"] = < text = <"Microscopy renal biopsy non neoplastic"> description = <"Microscopic findings related to a non-neoplastic renal biopsy"> > ["at0001"] = < text = <"Renal biopsy overall description"> description = <"Describes tissue types in the renal biopsy specimen."> > ["at0003"] = < text = <"Cortex"> description = <"Cortical tissue present, alternatively core length with cortical tissue, alternatively proportion of cortical tissue in relation to the core with renal tissue."> > ["at0004"] = < text = <"Present"> description = <"Cortical tissue present."> > ["at0005"] = < text = <"Absent"> description = <"Cortical tissue absent."> > ["at0006"] = < text = <"Indeterminate"> description = <"Presence of cortical tissue has not been determined."> > ["at0007"] = < text = <"Medulla"> description = <"Medullary tissue present, alternatively core length with medullary tissue, alternatively proportion of medullary tissue in relation to the core with renal tissue."> > ["at0008"] = < text = <"Present"> description = <"Medullary tissue present."> > ["at0009"] = < text = <"Absent"> description = <"Medullary tissue absent."> > ["at0010"] = < text = <"Indeterminate"> description = <"Presence of medullary tissue has not been determined."> > ["at0011"] = < text = <"Renale capsule"> description = <"A statement whether the renal capsule is present."> > ["at0012"] = < text = <"Other tissue elements"> description = <"Description of other tissue elements, e.g. muscle tissue."> > ["at0013"] = < text = <"Sceletal muscle and/or fat tissue and/or connective tissue"> description = <"Sceletal muscle and/or fat tissue and/or connective tissue present."> > ["at0014"] = < text = <"Renal pelvis mucosa"> description = <"Renal pelvis mucosa present."> > ["at0015"] = < text = <"Glomeruli"> description = <"Description of glomerular changes."> > ["at0016"] = < text = <"Glomeruli"> description = <"The maximum number of glomeruli irrespective of size present in one section; structures consisting of Bowman's capsule with empty Bowman's space are excluded."> > ["at0017"] = < text = <"Scorable glomeruli"> description = <"The number of glomeruli judged as adequate for scoring by the reporting pathologist."> > ["at0019"] = < text = <"Glomeruli solely with necrosis"> description = <"The number of glomeruli showing fibrinoid necrosis without crescent formation."> > ["at0020"] = < text = <"Glomeruli with crescents"> description = <"The number of glomeruli showing cellular or fibrocellular crescents."> > ["at0021"] = < text = <"Glomeruli with ischemic changes"> description = <"The number of glomeruli showing some degree of tuft retraction and wrinkling of capillary walls. Chronic ischemic changes might show fibrosis of Bowman's capsule."> > ["at0022"] = < text = <"Glomeruli with segmental sclerosis"> description = <"The number of glomeruli showing obliteration of capillary lumen by extracellular matrix in a portion of the tuft area with or without adhesions to the Bowman capsule, hyaline lesions, foam cells."> > ["at0023"] = < text = <"Glomeruli with global sclerosis"> description = <"The number of glomeruli showing scarring with obliteration of capillary lumen by extracellular matrix in the entire or nearly entire glomerular tuft. "> > ["at0024"] = < text = <"Normal glomeruli"> description = <"The number of glomeruli which appear normal without major changes."> > ["at0026"] = < text = <"Description of glomeruli"> description = <"A narrative description of glomerular findings, e.g. mesangial and endocapillary cellularity, capillary wall changes, podocytes, Bowman's space. For structured description of specific renal diseases use appropriate cluster (IgA nephropathy, lupus nephritis)."> > ["at0028"] = < text = <"Details of specific glomerular changes"> description = <"Slot for detailed description of specific glomerular changes. Include: openEHR-EHR-CLUSTER.glomerulus_segmental_glomerulosclerosis_classification.v1."> > ["at0029"] = < text = <"Tubules"> description = <"Description of tubular changes."> > ["at0030"] = < text = <"Tubular casts"> description = <"Structured report of kind of tubular casts present."> > ["at0031"] = < text = <"Myeloma casts"> description = <"Characteristic myeloma casts, often surrounded by reactive tubular epithelial cells. or multinucleated cells, present in tubular lumen."> > ["at0032"] = < text = <"Tamm Horsfall protein"> description = <"Presence of intratubular Tamm Horsfall protein."> > ["at0033"] = < text = <"Hyaline casts"> description = <"Presence of hyalin casts in tubular lumen."> > ["at0034"] = < text = <"Granular casts"> description = <"Presence of granular casts in tubular lumen."> > ["at0035"] = < text = <"Detached cells"> description = <"Detached cells, commonly epithelial cells, present in the tubular lumen."> > ["at0036"] = < text = <"Red blood cells"> description = <"Collections of red blood cells or red blood cell casts present in tubular lumen."> > ["at0037"] = < text = <"Granulocytes"> description = <"Presence of neutrophil granulocytes in tubular lumen."> > ["at0038"] = < text = <"Crystals"> description = <"Crystals present in tubular lumen."> > ["at0041"] = < text = <"Tubular atrophy"> description = <"Semiquantitative or quantitative assessment of tubular atrophy."> > ["at0042"] = < text = <"Tubular atrophy semiquantitative"> description = <"Semiquantitative visual assessment of tubular atrophy."> > ["at0043"] = < text = <"Absent"> description = <"Tubular atrophy is not present or minimal (few transsections)."> > ["at0044"] = < text = <"Slight"> description = <"Tubular atrophy in up to 25 % of the area of cortical tubules."> > ["at0045"] = < text = <"Moderate"> description = <"Tubular atrophy involving 25 - 50% of the area of cortical tubules."> > ["at0046"] = < text = <"Severe"> description = <"Tubular atrophy present in more than 50% of the area of cortical tubules."> > ["at0047"] = < text = <"Indeterminate"> description = <"Tubular atrophy could not be assessed, e.g. due to bad sections."> > ["at0048"] = < text = <"Tubules description"> description = <"Desription of tubular changes, e.g. hyalin droplet change, acute epithelial damage, cytoplasmic vacuolation, sloughing of cells, loss of brush border."> > ["at0049"] = < text = <"Interstitium"> description = <"Interstitial changes, especially semiquantitative or quantitative assessment of interstitial fibrosis."> > ["at0050"] = < text = <"Quantification of interstitial fibrosis"> description = <"Quantification of interstitial fibrosis by image analysis methods."> > ["at0051"] = < text = <"Image analysis details"> description = <"To record details of the image analysis, e.g. software, algorithm."> > ["at0052"] = < text = <"Technique"> description = <"Technique used to quantify fibrosis."> > ["at0053"] = < text = <"Sirius red unpolarized"> description = <"Sirius red stain unpolarized used for fibrosis quantification by image analysis"> > ["at0054"] = < text = <"Sirius red polarized"> description = <"Sirius red stain polarized used for fibrosis quantification by image analysis"> > ["at0055"] = < text = <"Collagen III immunohistochemistry"> description = <"Collagen III immunohistochemical stain used for fibrosis quantification by image analysis"> > ["at0056"] = < text = <"Percentage interstitial fibrosis"> description = <"Percentage of the renal cortical tissue involved by fibrosis."> > ["at0057"] = < text = <"Cortical area with fibrosis estimated"> description = <"Visual quantification of interstitial fibrosis; The fibrosis percentage is the percentage of abnormal cortical tissue with fibrosis."> > ["at0058"] = < text = <"Fibrous tissue estimated"> description = <"Visual quantification of interstitial fibrosis; The fibrosis percentage is the percentage of all cortical tissue (excluding tubules and glomeruli) occupied by fibrous tissue."> > ["at0059"] = < text = <"Interstitium description"> description = <"Description of interstitial changes, e.g. edema, inflammatory cells, deposits."> > ["at0060"] = < text = <"Vasculature"> description = <"Changes affecting arteries, arterioles, venes and peritubular capillaries."> > ["at0061"] = < text = <"Number of arteries"> description = <"Number of arteries in a renal biopsy."> > ["at0062"] = < text = <"Arteriosclerosis"> description = <"Amount of arteriosclerosis in the most affected vessel."> > ["at0063"] = < text = <"Not present/minimal"> description = <"There is no intimal sclerosis or intimal sclerosis is minimal."> > ["at0064"] = < text = <"Mild"> description = <"There is < 25% lumen narrowing by intimal fibrosis."> > ["at0065"] = < text = <"Moderate"> description = <"There is 25% - 50% lumen narrowing by intimal fibrosis."> > ["at0066"] = < text = <"Severe"> description = <"There is > 50% lumen narrowing by intimal fibrosis."> > ["at0067"] = < text = <"Arteriolosclerosis"> description = <"Amount of arteriolosclerosis in the most affected vessel."> > ["at0068"] = < text = <"Absent"> description = <"Arteriolosclerosis not present."> > ["at0069"] = < text = <"Present - nodular"> description = <"Nodular arteriolosclerosis is present."> > ["at0070"] = < text = <"Present - circumferential"> description = <"Circumferential arteriolosclerosis is present."> > ["at0071"] = < text = <"Vasculature description"> description = <"Description of vascular changes, e.g. vasculitis, venulitis. For description of severity of arteriosclerosis and arteriolosclerosis use coded text."> > ["at0072"] = < text = <"Amyloid"> description = <"Findings related to amyloid deposition."> > ["at0076"] = < text = <"Details of amyloid deposition "> description = <"Slot for detailed description of specific glomerular changes. Include: openEHR-EHR-CLUSTER.amyloid_deposition.v1"> > ["at0077"] = < text = <"Specific clinical situations"> description = <"Detailed structured description for specific clinical situations, e.g. biopsy of renal transplant, lupus nephritis, IgA nephropathy."> > ["at0078"] = < text = <"Multimedia representation"> description = <"Images from lesions could be attached here."> > ["at0079"] = < text = <"Multimedia representation of image analysis"> description = <"Images, graphs and tables from automatic image analysis of interstitial fibrosis."> > ["at0080"] = < text = <"Casts in tubules"> description = <"Choose the type of casts present in tubuli. Multiple choices possible."> > ["at0081"] = < text = <"Mixed casts"> description = <"Casts consisting of more than one component."> > ["at0082"] = < text = <"Pigmented casts"> description = <"Discolorated casts e.g. due to hemoglobin, myoglobin, drug pigments, bilirubin, melanin."> > ["at0088"] = < text = <"Podocytes"> description = <"Description of podocyte changes."> > ["at0089"] = < text = <"Hypertrophy"> description = <"Enlarged podocytes often with amphophil cytoplasm."> > ["at0091"] = < text = <"Absent"> description = <"Podocyte size is normal."> > ["at0092"] = < text = <"Slight"> description = <"Podocytes are slightly enlarged."> > ["at0093"] = < text = <"Moderate"> description = <"Podocytes are moderately enlarged."> > ["at0094"] = < text = <"Severe"> description = <"Podocytes are severely enlarged."> > ["at0096"] = < text = <"Bi- or multinucleated podocytes"> description = <"Podocytes with 2 or more nuclei."> > ["at0097"] = < text = <"Absent"> description = <"Bi- or multinucleated podocytes are not seen."> > ["at0098"] = < text = <"Present"> description = <"Bi- or multinucleated podocytes are seen."> > ["at0099"] = < text = <"Indeterminate"> description = <"Presence of bi- or mulitnucleated podocytes has not been determined."> > ["at0100"] = < text = <"Equivocal"> description = <"Presence of bi- or mulitnucleated podocytes is equivocal."> > ["at0101"] = < text = <"Resorption droplets"> description = <"Podocytes with PAS positive resorption droplets."> > ["at0102"] = < text = <"Absent"> description = <"Podocytes with resorption droplets are not present."> > ["at0103"] = < text = <"Singular cells"> description = <"One or few podocytes with resorption droplets are present."> > ["at0104"] = < text = <"Numerous cells"> description = <"Numerous podocytes with resorption droplets are present."> > ["at0105"] = < text = <"Indeterminate"> description = <"Presence of podocytes with resorption droplets could not be assessed, e.g. due tof bad morphology."> > ["at0106"] = < text = <"Equivocal"> description = <"It is uncertain whether podocytes with resorption droplets are present or not."> > ["at0107"] = < text = <"Pseudocysts"> description = <"Podocytes with pseudocysts."> > ["at0108"] = < text = <"Absent"> description = <"Podocytes with resorption droplets are not present."> > ["at0109"] = < text = <"Singular"> description = <"One of few podocytes with resorption droplets are present."> > ["at0110"] = < text = <"Numerous"> description = <"Numerous podocytes with resorption droplets are present."> > ["at0111"] = < text = <"Equivocal "> description = <"It is uncertain whether podocytes with resorption droplets are present or not."> > ["at0112"] = < text = <"Indeterminate"> description = <"Presence of podocytes with resorption droplets could not be assessed, e.g. due to bad morphology."> > ["at0113"] = < text = <"Equivocal"> description = <"It is uncertain whether podocyte size is normal or enlarged."> > ["at0114"] = < text = <"Indeterminate"> description = <"Podocyte size could not be assessed, e.g. due to bad morphology."> > ["at0115"] = < text = <"Mesangium"> description = <"Description of mesangial changes."> > ["at0116"] = < text = <"No abnormality detected"> description = <"Statement that no abnormality was detected on examination of the mesangial areas."> > ["at0117"] = < text = <"No abnormality detected"> description = <"Statement that no abnormality was detected on examination of podocytes."> > ["at0118"] = < text = <"Details of the mesangium"> description = <"A narrative description of mesangial changes."> > ["at0119"] = < text = <"Mesangial matrix increase"> description = <"Visual assessment of the amount of mesangial matrix."> > ["at0120"] = < text = <"Absent"> description = <"Mesangial matrix is not increased."> > ["at0121"] = < text = <"Slight"> description = <"Mesangial matrix is slightly increased."> > ["at0122"] = < text = <"Moderate"> description = <"Mesangial matrix is moderately increased."> > ["at0123"] = < text = <"Severe"> description = <"Mesangial matrix is severely increased."> > ["at0124"] = < text = <"Equivocal"> description = <"It is uncertain, whether mesangial matrix is increased."> > ["at0125"] = < text = <"Details of podocytes"> description = <"A narrative description of podocyte changes."> > ["at0126"] = < text = <"Indeterminate"> description = <"Mesangial matrix increase could not be assessed. e.g. due to bad morphology."> > ["at0128"] = < text = <"Mesangial hypercellularity"> description = <"A visual assessment of the cellularity of the mesangium. Normally there are 1 - 3 cells per mesangial area. The score is based on the most cellular mesangial area. Mesangial areas adjacent to the vascular stalk should not be scored."> comment = <"Definitions based on Roberts et al, 2009."> > ["at0129"] = < text = <"Absent"> description = <"There is no increase in mesangial cells."> > ["at0130"] = < text = <"Slight"> description = <"There is a slight increase in mesangial cellularity, usually 4-5 cells per mesangial area."> > ["at0131"] = < text = <"Moderate"> description = <"There is a moderate increase in mesangial cellularity, usually 6-7 cells per mesangial area."> > ["at0132"] = < text = <"Severe"> description = <"There is a severe increase in mesangial cellularity, usually 8 or more cells per mesangial area."> > ["at0133"] = < text = <"Equivocal"> description = <"It is uncertain whether there is an increase in mesangial cellularity or not."> > ["at0134"] = < text = <"Indeterminate"> description = <"Mesangial cellularity could not be assessed, e.g. due to bad morphology or thick sections."> > ["at0138"] = < text = <"Capillaries"> description = <"Description of glomerular capillary changes."> > ["at0139"] = < text = <"No abnormality detected"> description = <"Statement that no abnormality was detected on examination of the glomerular capillaries."> > ["at0140"] = < text = <"Capillary wall thickening"> description = <"A visual assessment of the capillary wall thickness."> > ["at0142"] = < text = <"Details of glomerular capillaries"> description = <"A narrative description of glomerular capillary changes."> > ["at0143"] = < text = <"Absent"> description = <"Glomerular capillary walls are not thickened."> > ["at0144"] = < text = <"Focal"> description = <"Glomerular capillary walls are focally thickened."> > ["at0145"] = < text = <"Diffuse"> description = <"Glomerular capillary walls are diffusely thickened."> > ["at0146"] = < text = <"Segmental"> description = <"Glomerular capillary walls are segmentally thickened."> > ["at0147"] = < text = <"Global"> description = <"Glomerular capillary walls are globally thickened."> > ["at0148"] = < text = <"Equivocal"> description = <"It is uncertain whether glomerular capillary walls are thickened."> > ["at0149"] = < text = <"Indeterminate"> description = <"Glomerular capillary wall thickness could not be assessed, e.g. due to section thickness."> > ["at0150"] = < text = <"Capillary wall duplication"> description = <"A visual assessment of the presence of capillary wall duplication."> > ["at0151"] = < text = <"Absent"> description = <"Capillary wall duplication is not present."> > ["at0152"] = < text = <"Focal"> description = <"Capillary wall duplication is focally present."> > ["at0153"] = < text = <"Diffuse"> description = <"Capillary wall duplication is diffusely present."> > ["at0154"] = < text = <"Segmental "> description = <"Capillary wall duplication is segmentally present."> > ["at0155"] = < text = <"Global"> description = <"Capillary wall duplication is globally present."> > ["at0156"] = < text = <"Equivocal"> description = <"It is unceratin whether capillary wall duplication is present."> > ["at0157"] = < text = <"Indeterminate"> description = <"Capillary wall thickening could not be assessed, e.g. due to bad morphology."> > ["at0159"] = < text = <"Capillary lumen"> description = <"Description of changes in the capillary lumens."> > ["at0160"] = < text = <"Endocapillary hypercellularity"> description = <"Visual assessment of endocapillary hypercellularity."> > ["at0161"] = < text = <"Absent"> description = <"Endocapillary hypercellularity is not present."> > ["at0162"] = < text = <"Focal"> description = <"Endocapillary hypercellularity is focally present."> > ["at0163"] = < text = <"Diffuse"> description = <"Endocapillary hypercellularity is diffusely present."> > ["at0164"] = < text = <"Segmental"> description = <"Endocapillary hypercellularity is segmentally present."> > ["at0165"] = < text = <"Global"> description = <"Endocapillary hypercellularity is globally present."> > ["at0166"] = < text = <"Equivocal"> description = <"It is uncertain whether there is endocapillary hypercellularity."> > ["at0167"] = < text = <"Indeterminate"> description = <"Endocapillary cellularity could not be assessed, e.g. due to bad morphology."> > ["at0168"] = < text = <"Thrombi"> description = <"Visual assessment of intracapillary thrombi."> > ["at0169"] = < text = <"Absent"> description = <"Intracapillary thrombi are absent."> > ["at0170"] = < text = <"Endocapillary hypercellularity"> description = <"Findings related to endocapillary cellularity."> > ["at0171"] = < text = <"Cell type"> description = <"Composition of intracapillary cells."> > ["at0172"] = < text = <"Endothelial cells"> description = <"Endothelial cells are part of the intracapillary infiltrate."> > ["at0173"] = < text = <"Macrophages"> description = <"Macrophages are part of the intracapillary infiltrate."> > ["at0174"] = < text = <"Neutrophil granulocytes"> description = <"Neutrophil granulocytes are part of the intracapillary infiltrate."> > ["at0175"] = < text = <"Lymphocytes"> description = <"Lymphocytes are part of the intracapillary infiltrate."> > ["at0176"] = < text = <"Atypical cells"> description = <"Atypical cells are part of the intracapillary infiltrate."> > ["at0178"] = < text = <"Focal"> description = <"Intracapillary thrombi are present in less than half of the glomeruli."> > ["at0179"] = < text = <"Diffuse"> description = <"Intracapillary thrombi are present in more than half of the glomeruli."> > ["at0180"] = < text = <"Segmental"> description = <"Intracapillary thrombi are present only in a part of the glomerular tuft."> > ["at0181"] = < text = <"Global"> description = <"Intracapillary thrombi are present in the whole glomerular tuft."> > ["at0182"] = < text = <"Equivocal"> description = <"It is uncertain whether intracapillary thrombi are present or not."> > ["at0183"] = < text = <"Indeterminate"> description = <"Presence of intracapillary thrombi could not be assessed, e.g. because of bad sections."> > ["at0184"] = < text = <"Thrombi"> description = <"Findings related to intracapillary thrombi."> > ["at0185"] = < text = <"Thrombus type"> description = <"Type of intracapillary thrombi."> > ["at0186"] = < text = <"Hyalin"> description = <"The intracapillary thrombi are mainly hyalinous."> > ["at0187"] = < text = <"Fibrin"> description = <"The intracapillary thrombi consist mainly of fibrin."> > ["at0188"] = < text = <"Mesangial cell interposition"> description = <"A visual assesment of the presence of interposed cells in the capillary periphery."> > ["at0189"] = < text = <"Present"> description = <"Mesangial interposition is present."> > ["at0190"] = < text = <"Absent"> description = <"Mesangial interposition is absent."> > ["at0191"] = < text = <"Equivocal"> description = <"It is uncertain whether mesangial interposition is present."> > ["at0192"] = < text = <"Indeterminate"> description = <"Mesangial interposition could not be assessed, e.g. because of bad sections."> > ["at0193"] = < text = <"Mesangial nodularity"> description = <"A visual assessment of the presence of acellular PAS positive mesangial nodules."> > ["at0194"] = < text = <"Absent"> description = <"Mesangial nodules are absent."> > ["at0195"] = < text = <"Present"> description = <"Mesangial nodules are present."> > ["at0196"] = < text = <"Equivocal"> description = <"It is uncertain whether mesangial nodules are present."> > ["at0197"] = < text = <"Indeterminate"> description = <"Presence of mesangial nodules could not be assessed, e.g. because of bad sections."> > ["at0202"] = < text = <"Tubular epithelial cell changes"> description = <"Description of tubular epithelial cell changes. Multiple choices possible."> > ["at0203"] = < text = <"Hyaline droplet change"> description = <"PAS positive absorption droplets in the epithelium of proximal tubules, usually indicating glomerular proteinuria."> > ["at0204"] = < text = <"Fine vacuolization"> description = <"Fine, even vacuolization of the proximal tubular epithelium. Hydropic change is a synonym. If related to infusion of hypertonic solutions, the change is also described as osmotic nephrosis. If related to cyclosporin therapy, the change is called isometric vacuolization."> > ["at0205"] = < text = <"Coarse vacuolization"> description = <"Irregular and coarse vacuolization of the tubular epithelium. The change might be associated with hypokaliemia or tubulotoxicity."> > ["at0206"] = < text = <"Fatty change"> description = <"Fine vacuoles containing lipid, often at the base of the tubular epithelial cells. Fat can be demonstrated by lipid stains on frozen sections."> > ["at0207"] = < text = <"Giant mitochondria"> description = <"Enlarged mitochondria visuable as eosinophilic bodies in tubular epithelial cells."> > ["at0208"] = < text = <"Glomeruli with adhesions"> description = <"The number of glomeruli showing coneective tissue connections between the tuft and Bowman's capsule without overt sclerosis."> > ["at0209"] = < text = <"No abnormality detected"> description = <"A statement that no abnormality was detected in renal tubules."> > ["at0210"] = < text = <"No abnormality detected"> description = <"A statement that no abnormality was detected in the renal interstitium."> > ["at0211"] = < text = <"No abnormality detected"> description = <"A statement that no abnormality was detected in the renal vasculature."> > ["at0212"] = < text = <"Amyloid not detected"> description = <"A statement that no amyloid deposition was detected."> > > > >